Fraxinus  16.5.0-fx-rc4
An IGT application
 All Classes Namespaces Files Functions Variables Typedefs Enumerations Enumerator Friends Macros Groups Pages
cxPNNReconstructionMethodService.h
Go to the documentation of this file.
1 /*=========================================================================
2 This file is part of CustusX, an Image Guided Therapy Application.
3 
4 Copyright (c) 2008-2014, SINTEF Department of Medical Technology
5 All rights reserved.
6 
7 Redistribution and use in source and binary forms, with or without
8 modification, are permitted provided that the following conditions are met:
9 
10 1. Redistributions of source code must retain the above copyright notice,
11  this list of conditions and the following disclaimer.
12 
13 2. Redistributions in binary form must reproduce the above copyright notice,
14  this list of conditions and the following disclaimer in the documentation
15  and/or other materials provided with the distribution.
16 
17 3. Neither the name of the copyright holder nor the names of its contributors
18  may be used to endorse or promote products derived from this software
19  without specific prior written permission.
20 
21 THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
22 AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
23 IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
24 DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
25 FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
26 DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
27 SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
28 CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
29 OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
30 OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
31 =========================================================================*/
32 
33 #ifndef CXPNNRECONSTRUCTIONMETHODSERVICE_H_
34 #define CXPNNRECONSTRUCTIONMETHODSERVICE_H_
35 
37 #include "org_custusx_usreconstruction_pnn_Export.h"
38 #include "cxTransform3D.h"
39 class ctkPluginContext;
40 
41 namespace cx
42 {
43 
55 class org_custusx_usreconstruction_pnn_EXPORT PNNReconstructionMethodService : public ReconstructionMethodService
56 {
58 public:
59  PNNReconstructionMethodService(ctkPluginContext* context);
61 
62  virtual QString getName() const;
63 
64  virtual std::vector<PropertyPtr> getSettings(QDomElement root);
65  virtual bool reconstruct(ProcessedUSInputDataPtr input, vtkImageDataPtr outputData, QDomElement settings);
66 
67 
68 private:
69  DoublePropertyPtr getInterpolationStepsOption(QDomElement root);
70  bool validPixel(int x, int y, const Eigen::Array3i& dims, unsigned char* rawPointer)
71  {
72  return (x >= 0) && (x < dims[0]) && (y >= 0) && (y < dims[1]) && (rawPointer[x + y * dims[0]] != 0);
73  }
74 
75  bool validVoxel(int x, int y, int z, const int* dims)
76  {
77  return (x >= 0) && (x < dims[0]) && (y >= 0) && (y < dims[1]) && (z >= 0) && (z < dims[2]);
78  }
79 
80  void interpolate(ImagePtr inputData, vtkImageDataPtr outputData, QDomElement settings);
81  vtkImageDataPtr createMask(vtkImageDataPtr inputData);
82  void fillHole(unsigned char *inputPointer, unsigned char *outputPointer, int x, int y, int z, const Eigen::Array3i& dim, int interpolationSteps);
83 
84 
85 };
86 //typedef boost::shared_ptr<PNNReconstructionMethodService> PNNReconstructionMethodService*;
87 
88 } /* namespace cx */
89 
90 #endif /* CXPNNRECONSTRUCTIONMETHODSERVICE_H_ */
91 
Abstract interface for reconstruction algorithm.
boost::shared_ptr< class Image > ImagePtr
Definition: cxDicomWidget.h:48
Settings * settings()
Shortcut for accessing the settings instance.
Definition: cxSettings.cpp:42
boost::shared_ptr< class DoubleProperty > DoublePropertyPtr
boost::shared_ptr< class ProcessedUSInputData > ProcessedUSInputDataPtr
vtkSmartPointer< class vtkImageData > vtkImageDataPtr