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cxReconstructCore.h
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1 /*=========================================================================
2 This file is part of CustusX, an Image Guided Therapy Application.
3 
4 Copyright (c) 2008-2014, SINTEF Department of Medical Technology
5 All rights reserved.
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7 Redistribution and use in source and binary forms, with or without
8 modification, are permitted provided that the following conditions are met:
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10 1. Redistributions of source code must retain the above copyright notice,
11  this list of conditions and the following disclaimer.
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13 2. Redistributions in binary form must reproduce the above copyright notice,
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31 =========================================================================*/
32 
33 #ifndef CXRECONSTRUCTCORE_H_
34 #define CXRECONSTRUCTCORE_H_
35 
36 #include "org_custusx_usreconstruction_Export.h"
37 
38 #include "cxBoundingBox3D.h"
39 #include "cxForwardDeclarations.h"
41 
42 namespace cx
43 {
45 //typedef class ReconstructionMethodService* ReconstructionMethodServicePtr;
46 
47 typedef boost::shared_ptr<class ReconstructCore> ReconstructCorePtr;
48 
56 class org_custusx_usreconstruction_EXPORT ReconstructCore
57 {
58 public:
62  struct InputParams
63  {
65  mExtraTimeCalibration(0),
66  mAlignTimestamps(false),
67  mMaskReduce(0),
68  mAngio(false),
69  mMaxOutputVolumeSize(1024*1024)
70  {}
73  double mMaskReduce;
74  QString mOrientation;
75 
76  QString mAlgorithmUid;
77  QDomElement mAlgoSettings;
78 // QString mOutputRelativePath;///< Relative path to the output image
79 // QString mOutputBasePath;///< Global path where the relative path starts, for the output image
80  QString mShaderPath;
81  bool mAngio;
84  };
85 
86  ReconstructCore(PatientModelServicePtr patientModelService);
87  virtual ~ReconstructCore();
88 
89  // used for reconstruction algo
90  void initialize(InputParams input, ReconstructionMethodService* algorithm);
91  void initialize(ProcessedUSInputDataPtr fileData, OutputVolumeParams outputVolumeParams);
92  ImagePtr reconstruct();
93  void threadedPreReconstruct();
94  void threadedReconstruct();
95  void threadedPostReconstruct();
96  ImagePtr getOutput();
97 
98  // published helper methods, also needed for parameter display outside of reconstruction execution:
99  InputParams getInputParams() { return mInput; }
100 
101 private:
102  bool validInputData() const;
103  QString generateOutputUid();
104  QString generateImageName(QString uid) const;
105 
106  vtkImageDataPtr generateRawOutputVolume();
107  ImagePtr generateOutputVolume(vtkImageDataPtr rawOutput);
108 
109  // input data
110  InputParams mInput;
111  ProcessedUSInputDataPtr mFileData;
112 
113  // generated data
114  ReconstructionMethodService* mAlgorithm;
115  vtkImageDataPtr mRawOutput;
116  ImagePtr mOutput;
117  OutputVolumeParams mOutputVolumeParams;
118  bool mSuccess;
119  PatientModelServicePtr mPatientModelService;
120 };
121 
122 } /* namespace cx */
123 #endif /* CXRECONSTRUCTCORE_H_ */
Abstract interface for reconstruction algorithm.
QString mShaderPath
name of shader folder
boost::shared_ptr< class Image > ImagePtr
Definition: cxDicomWidget.h:48
Helper struct for sending and controlling output volume properties.
boost::shared_ptr< class PatientModelService > PatientModelServicePtr
InputParams getInputParams()
bool mAngio
true for angio data, false is B-mode.
boost::shared_ptr< class ProcessedUSInputData > ProcessedUSInputDataPtr
vtkSmartPointer< class vtkImageData > vtkImageDataPtr
Algorithm part of reconstruction - no dependencies on parameter classes.
boost::shared_ptr< class ReconstructCore > ReconstructCorePtr