cxDICOMReader.h

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/*=========================================================================
This file is part of CustusX, an Image Guided Therapy Application.

Copyright (c) SINTEF Department of Medical Technology.
All rights reserved.

CustusX is released under a BSD 3-Clause license.

See Lisence.txt (https://github.com/SINTEFMedtek/CustusX/blob/master/License.txt) for details.
=========================================================================*/

#ifndef CXDICOMREADER_H
#define CXDICOMREADER_H

#include "cxFileReaderWriterService.h"
#include "org_custusx_core_filemanager_Export.h"
class QProgressDialog;

typedef QSharedPointer<class ctkDICOMDatabase> ctkDICOMDatabasePtr;

namespace cx {

class org_custusx_core_filemanager_EXPORT DICOMReader : public FileReaderWriterImplService
{
public:
        Q_INTERFACES(cx::FileReaderWriterService)
        DICOMReader(PatientModelServicePtr patientModelService);
        virtual ~DICOMReader() {}

        bool isNull(){return false;}

        virtual bool canRead(const QString& type, const QString& filename);
        virtual bool readInto(DataPtr data, QString path);
        bool readInto(ImagePtr image, QString filename);
        virtual QString canReadDataType() const;
        virtual DataPtr read(const QString& uid, const QString& filename);
        std::vector<DataPtr> read(const QString &filename);

        void write(DataPtr data, const QString &filename) {}
        QString canWriteDataType() const;
        bool canWrite(const QString &type, const QString &filename) const;

        virtual vtkImageDataPtr loadVtkImageData(QString filename);

protected:
        std::vector<ImagePtr> importSeries(QString fileName, bool readBestSeries);
        QString getBestDICOMSeries(ctkDICOMDatabasePtr database);
        QStringList getAllDICOMSeries(ctkDICOMDatabasePtr database);
        std::vector<ImagePtr> importBestSeries(ctkDICOMDatabasePtr database);
        std::vector<ImagePtr> importAllSeries(ctkDICOMDatabasePtr database, QProgressDialog &progress);
        void stopDCMTKMessages();
        bool canReadDir(QString dirname, bool checkSubDirs);
        bool canReadFile(QString filename);
        void addFolderToDicomDatabase(ctkDICOMDatabasePtr database, QString folder);
        QStringList findAllSubfoldersWithDicomFiles(QString folder, QProgressDialog &progress);
        QStringList findAllSubDirs(QString folder);
};

} //cx
#endif // CXDICOMREADER_H