#include <cxRouteToTarget.h>

Public Member Functions
	RouteToTarget ()

virtual	~RouteToTarget ()

void	setBloodVesselVolume (ImagePtr bloodVesselVolume)

Eigen::MatrixXd	getCenterlinePositions (vtkPolyDataPtr centerline_r)

void	setSmoothing (bool smoothing)

void	processCenterline (MeshPtr mesh)

void	setBranchList (BranchListPtr branchList)

BranchListPtr	getBranchList ()

void	processBloodVesselCenterline (Eigen::MatrixXd positions)

void	findClosestPointInBranches (Vector3D targetCoordinate_r)

void	findClosestPointInBloodVesselBranches (Vector3D targetCoordinate_r)

void	findRoutePositions ()

void	findRoutePositionsInBloodVessels ()

void	searchBranchUp (BranchPtr searchBranchPtr, int startIndex)

void	searchBloodVesselBranchUp (BranchPtr searchBranchPtr, int startIndex)

vtkPolyDataPtr	findRouteToTarget (PointMetricPtr targetPoint)

vtkPolyDataPtr	findExtendedRoute (PointMetricPtr targetPoint)

vtkPolyDataPtr	findRouteToTargetAlongBloodVesselCenterlines (MeshPtr bloodVesselCenterlineMesh, PointMetricPtr targetPoint)

vtkPolyDataPtr	generateAirwaysFromBloodVesselCenterlines ()

bool	makeConnectedAirwayAndBloodVesselRoute ()

vtkPolyDataPtr	getConnectedAirwayAndBloodVesselRoute ()

vtkPolyDataPtr	addVTKPoints (std::vector< Eigen::Vector3d > positions)

void	addRouteInformationToFile (VisServicesPtr services)

void	setBloodVesselRadius ()

double	calculateBloodVesselRadius (Eigen::Vector3d position, Eigen::Vector3d orientation)

double	findDistanceToSegmentationEdge (vtkImageDataPtr bloodVesselImage, Eigen::Vector3i indexVector, Eigen::Vector3d perpendicularVector, int dim, double spacing, int direction)

void	makeMarianaCenterlineFile (QString filename)

QJsonArray	makeMarianaCenterlineJSON ()

std::vector< Eigen::Vector3d >	getRoutePositions (bool extendedRoute=true)

std::vector< BranchPtr >	getRouteBranches ()

std::vector< double >	getCameraRotation ()

std::vector< int >	getBranchingIndex ()

double	getTracheaLength ()

Static Public Member Functions
static double	calculateRouteLength (std::vector< Eigen::Vector3d > route)

static std::vector< Eigen::Vector3d >	getRoutePositions (MeshPtr route)

Detailed Description

Definition at line 17 of file cxRouteToTarget.h.

Constructor & Destructor Documentation

cx::RouteToTarget::RouteToTarget ( )

Definition at line 30 of file cxRouteToTarget.cpp.

cx::RouteToTarget::~RouteToTarget ( )

virtual

Definition at line 39 of file cxRouteToTarget.cpp.

Member Function Documentation

void cx::RouteToTarget::addRouteInformationToFile ( VisServicesPtr services )

Definition at line 466 of file cxRouteToTarget.cpp.

vtkPolyDataPtr cx::RouteToTarget::addVTKPoints ( std::vector< Eigen::Vector3d > positions )

Definition at line 443 of file cxRouteToTarget.cpp.

double cx::RouteToTarget::calculateBloodVesselRadius	(	Eigen::Vector3d	position,
		Eigen::Vector3d	orientation
	)

Definition at line 562 of file cxRouteToTarget.cpp.

double cx::RouteToTarget::calculateRouteLength ( std::vector< Eigen::Vector3d > route )

static

Definition at line 527 of file cxRouteToTarget.cpp.

void cx::RouteToTarget::findClosestPointInBloodVesselBranches ( Vector3D targetCoordinate_r )

Definition at line 169 of file cxRouteToTarget.cpp.

void cx::RouteToTarget::findClosestPointInBranches ( Vector3D targetCoordinate_r )

Definition at line 144 of file cxRouteToTarget.cpp.

double cx::RouteToTarget::findDistanceToSegmentationEdge	(	vtkImageDataPtr	bloodVesselImage,
		Eigen::Vector3i	indexVector,
		Eigen::Vector3d	perpendicularVector,
		int *	dim,
		double *	spacing,
		int	direction
	)

Definition at line 600 of file cxRouteToTarget.cpp.

vtkPolyDataPtr cx::RouteToTarget::findExtendedRoute ( PointMetricPtr targetPoint )

Definition at line 279 of file cxRouteToTarget.cpp.

void cx::RouteToTarget::findRoutePositions ( )

Definition at line 195 of file cxRouteToTarget.cpp.

void cx::RouteToTarget::findRoutePositionsInBloodVessels ( )

Definition at line 202 of file cxRouteToTarget.cpp.

vtkPolyDataPtr cx::RouteToTarget::findRouteToTarget ( PointMetricPtr targetPoint )

Definition at line 266 of file cxRouteToTarget.cpp.

vtkPolyDataPtr cx::RouteToTarget::findRouteToTargetAlongBloodVesselCenterlines	(	MeshPtr	bloodVesselCenterlineMesh,
		PointMetricPtr	targetPoint
	)

Definition at line 306 of file cxRouteToTarget.cpp.

vtkPolyDataPtr cx::RouteToTarget::generateAirwaysFromBloodVesselCenterlines ( )

Definition at line 332 of file cxRouteToTarget.cpp.

std::vector< int > cx::RouteToTarget::getBranchingIndex ( )

Definition at line 650 of file cxRouteToTarget.cpp.

BranchListPtr cx::RouteToTarget::getBranchList ( )

Definition at line 93 of file cxRouteToTarget.cpp.

std::vector< double > cx::RouteToTarget::getCameraRotation ( )

Definition at line 643 of file cxRouteToTarget.cpp.

Eigen::MatrixXd cx::RouteToTarget::getCenterlinePositions ( vtkPolyDataPtr centerline_r )

Definition at line 48 of file cxRouteToTarget.cpp.

vtkPolyDataPtr cx::RouteToTarget::getConnectedAirwayAndBloodVesselRoute ( )

Definition at line 421 of file cxRouteToTarget.cpp.

std::vector< BranchPtr > cx::RouteToTarget::getRouteBranches ( )

Definition at line 636 of file cxRouteToTarget.cpp.

std::vector< Eigen::Vector3d > cx::RouteToTarget::getRoutePositions ( bool extendedRoute = true )

Definition at line 623 of file cxRouteToTarget.cpp.

std::vector< Eigen::Vector3d > cx::RouteToTarget::getRoutePositions ( MeshPtr route )

static

Definition at line 508 of file cxRouteToTarget.cpp.

double cx::RouteToTarget::getTracheaLength ( )

Definition at line 500 of file cxRouteToTarget.cpp.

bool cx::RouteToTarget::makeConnectedAirwayAndBloodVesselRoute ( )

Definition at line 348 of file cxRouteToTarget.cpp.

void cx::RouteToTarget::makeMarianaCenterlineFile ( QString filename )

Definition at line 655 of file cxRouteToTarget.cpp.

QJsonArray cx::RouteToTarget::makeMarianaCenterlineJSON ( )

Definition at line 690 of file cxRouteToTarget.cpp.

void cx::RouteToTarget::processBloodVesselCenterline ( Eigen::MatrixXd positions )

Definition at line 98 of file cxRouteToTarget.cpp.

void cx::RouteToTarget::processCenterline ( MeshPtr mesh )

Definition at line 69 of file cxRouteToTarget.cpp.

void cx::RouteToTarget::searchBloodVesselBranchUp	(	BranchPtr	searchBranchPtr,
		int	startIndex
	)

Definition at line 242 of file cxRouteToTarget.cpp.

void cx::RouteToTarget::searchBranchUp	(	BranchPtr	searchBranchPtr,
		int	startIndex
	)

Definition at line 215 of file cxRouteToTarget.cpp.

void cx::RouteToTarget::setBloodVesselRadius ( )

Definition at line 542 of file cxRouteToTarget.cpp.

void cx::RouteToTarget::setBloodVesselVolume ( ImagePtr bloodVesselVolume )

Definition at line 43 of file cxRouteToTarget.cpp.

void cx::RouteToTarget::setBranchList ( BranchListPtr branchList )

Definition at line 88 of file cxRouteToTarget.cpp.

void cx::RouteToTarget::setSmoothing ( bool smoothing )

Definition at line 64 of file cxRouteToTarget.cpp.

The documentation for this class was generated from the following files:

/media/jenkins/bamboo/buildagent/xml-data/build-dir/CX-NI-JOB1/CX/CX/source/plugins/org.custusx.filter.routetotarget/cxRouteToTarget.h
/media/jenkins/bamboo/buildagent/xml-data/build-dir/CX-NI-JOB1/CX/CX/source/plugins/org.custusx.filter.routetotarget/cxRouteToTarget.cpp

Public Member Functions

Static Public Member Functions

Detailed Description

Constructor & Destructor Documentation

Member Function Documentation