A volumetric data set. More...

#include <cxImage.h>

Inheritance diagram for cx::Image:

Classes
struct	ShadingStruct

Signals
void	vtkImageDataChanged ()
	emitted when the vktimagedata are invalidated and must be retrieved anew. More...

void	transferFunctionsChanged ()
	emitted when image transfer functions in 2D or 3D are changed. More...

void	clipPlanesChanged ()

void	cropBoxChanged ()

Signals inherited from cx::Data
void	transformChanged ()
	emitted when transform is changed More...

void	propertiesChanged ()
	emitted when one of the metadata properties (uid, name etc) changes More...

Public Member Functions
ImagePtr	copy ()

virtual	~Image ()

	Image (const QString &uid, const vtkImageDataPtr &data, const QString &name="")

virtual void	intitializeFromParentImage (ImagePtr parentImage)

virtual void	setVtkImageData (const vtkImageDataPtr &data, bool resetTransferFunctions=true)

virtual vtkImageDataPtr	getBaseVtkImageData ()

virtual vtkImageDataPtr	getGrayScaleVtkImageData ()
	as getBaseVtkImageData(), but constrained to 1 component if multicolor. More...

virtual vtkImageDataPtr	get8bitGrayScaleVtkImageData ()
	Have never been used or tested. Create a test for it. More...

virtual ImagePtr	getUnsigned (ImagePtr self)

virtual QString	getModality () const

virtual void	setModality (const QString &val)

virtual QString	getImageType () const

virtual void	setImageType (const QString &val)

virtual ImageTF3DPtr	getTransferFunctions3D ()

virtual void	setTransferFunctions3D (ImageTF3DPtr transferFuntion)

virtual ImageLUT2DPtr	getLookupTable2D ()

virtual void	setLookupTable2D (ImageLUT2DPtr imageLookupTable2D)

virtual void	setInitialWindowLevel (double width, double level)

double	getInitialWindowLevel () const

double	getInitialWindowWidth () const

virtual DoubleBoundingBox3D	boundingBox () const
	bounding box in image space More...

virtual Eigen::Array3d	getSpacing () const

virtual vtkImageAccumulatePtr	getHistogram ()

virtual int	getMax ()

virtual int	getMin ()

virtual int	getRange ()
	For convenience: getMax() - getMin() More...

virtual int	getMaxAlphaValue ()
	Max alpha value (probably 255) More...

virtual void	setShadingOn (bool on)

virtual bool	getShadingOn () const

virtual void	setShadingAmbient (double ambient)
	Set shading ambient parmeter. More...

virtual void	setShadingDiffuse (double diffuse)
	Set shading diffuse parmeter. More...

virtual void	setShadingSpecular (double specular)
	Set shading specular parmeter. More...

virtual void	setShadingSpecularPower (double specularPower)
	Set shading specular power parmeter. More...

virtual double	getShadingAmbient ()
	Get shading ambient parmeter. More...

virtual double	getShadingDiffuse ()
	Get shading diffuse parmeter. More...

virtual double	getShadingSpecular ()
	Get shading specular parmeter. More...

virtual double	getShadingSpecularPower ()
	Get shading specular power parmeter. More...

virtual Image::ShadingStruct	getShading ()

virtual void	setShading (Image::ShadingStruct shading)

void	addXml (QDomNode &dataNode)
	adds xml information about the image and its variabels More...

virtual void	parseXml (QDomNode &dataNode)
	Use a XML node to load data. More...

virtual bool	load (QString path)

virtual QString	getType () const

virtual void	setCropping (bool on)

virtual bool	getCropping () const

virtual void	setCroppingBox (const DoubleBoundingBox3D &bb_d)

virtual DoubleBoundingBox3D	getCroppingBox () const

virtual void	addPersistentClipPlane (vtkPlanePtr plane)

virtual std::vector< vtkPlanePtr >	getAllClipPlanes ()

virtual void	clearPersistentClipPlanes ()

virtual void	setInteractiveClipPlane (vtkPlanePtr plane)
	set a plane that is not saved More...

void	mergevtkSettingsIntosscTransform ()

void	resetTransferFunctions (bool _2D=true, bool _3D=true)
	Resets the transfer functions and creates new defaut values. More...

void	moveThisAndChildrenToThread (QThread *thread)
	Move this and all children to thread. Use the thread is generated in a worker thread and the result is to be used in the main thread. More...

void	setInterpolationTypeToNearest ()

void	setInterpolationTypeToLinear ()

void	setInterpolationType (int val)

int	getInterpolationType () const

vtkImageDataPtr	resample (long maxVoxels)

virtual void	save (const QString &basePath)

void	startThresholdPreview (const Eigen::Vector2d &threshold)

void	stopThresholdPreview ()

Public Member Functions inherited from cx::Data
	Data (const QString &uid, const QString &name="")

virtual	~Data ()

void	setUid (const QString &uid)

void	setName (const QString &name)

void	setAcquisitionTime (QDateTime time)

virtual RegistrationHistoryPtr	get_rMd_History ()

LandmarksPtr	getLandmarks ()

virtual QString	getUid () const

virtual QString	getName () const

virtual Transform3D	get_rMd () const

virtual QDateTime	getAcquisitionTime () const

virtual QString	getFilename () const

virtual void	setFilename (QString val)

virtual QString	getSpace ()

virtual QString	getParentSpace ()

virtual CoordinateSystem	getCoordinateSystem ()

Static Public Member Functions
static ImagePtr	create (const QString &uid, const QString &name)

static QString	getTypeName ()

static vtkImageDataPtr	createDummyImageData (int axisSize, int maxVoxelValue)
	Create a moc object of vtkImageData. More...

Protected Slots
virtual void	transformChangedSlot ()

Protected Slots inherited from cx::Data
virtual void	transformChangedSlot ()

Protected Attributes
vtkImageDataPtr	mBaseImageData
	image data in data space More...

vtkImageDataPtr	mBaseGrayScaleImageData
	image data in data space More...

vtkImageAccumulatePtr	mHistogramPtr
	Histogram. More...

ImagePtr	mUnsigned
	version of this containing unsigned data. More...

ShadingStruct	mShading

bool	mUseCropping
	image should be cropped using mCroppingBox More...

DoubleBoundingBox3D	mCroppingBox_d
	box defining the cropping size. More...

std::vector< vtkPlanePtr >	mPersistentClipPlanes

vtkPlanePtr	mInteractiveClipPlane

QString	mModality
	modality of the image, defined as DICOM tag (0008,0060), Section 3, C.7.3.1.1.1 More...

QString	mImageType
	type of the image, defined as DICOM tag (0008,0008) (mainly value 3, but might be a merge of value 4), Section 3, C.7.6.1.1.2 More...

double	mMaxRGBIntensity

int	mInterpolationType
	mirror the interpolationType in vtkVolumeProperty More...

Protected Attributes inherited from cx::Data
QString	mUid

QString	mName

QString	mFilename

QDateTime	mAcquisitionTime

LandmarksPtr	mLandmarks

REGISTRATION_STATUS	mRegistrationStatus

RegistrationHistoryPtr	m_rMd_History

Detailed Description

A volumetric data set.

One volumetric data set, represented as a vtkImageData, along with auxiliary data.

Definition at line 66 of file cxImage.h.

Constructor & Destructor Documentation

cx::Image::~Image ( )

virtual

Definition at line 123 of file cxImage.cpp.

cx::Image::Image	(	const QString &	uid,
		const vtkImageDataPtr &	data,
		const QString &	name = `""`
	)

Definition at line 127 of file cxImage.cpp.

Member Function Documentation

void cx::Image::addPersistentClipPlane ( vtkPlanePtr plane )

virtual

Definition at line 721 of file cxImage.cpp.

void cx::Image::addXml ( QDomNode & dataNode )

virtual

adds xml information about the image and its variabels

Parameters

dataNode Data node in the XML tree

Returns: The created subnode

Reimplemented from cx::Data.

Definition at line 469 of file cxImage.cpp.

DoubleBoundingBox3D cx::Image::boundingBox ( ) const

virtual

bounding box in image space

Implements cx::Data.

Reimplemented in cx::UnsignedDerivedImage.

Definition at line 360 of file cxImage.cpp.

void cx::Image::clearPersistentClipPlanes ( )

virtual

Definition at line 737 of file cxImage.cpp.

void cx::Image::clipPlanesChanged ( )

signal

ImagePtr cx::Image::copy ( )

Definition at line 144 of file cxImage.cpp.

ImagePtr cx::Image::create	(	const QString &	uid,
		const QString &	name
	)

static

Definition at line 118 of file cxImage.cpp.

vtkImageDataPtr cx::Image::createDummyImageData	(	int	axisSize,
		int	maxVoxelValue
	)

static

Create a moc object of vtkImageData.

Definition at line 811 of file cxImage.cpp.

void cx::Image::cropBoxChanged ( )

signal

vtkImageDataPtr cx::Image::get8bitGrayScaleVtkImageData ( )

virtual

Have never been used or tested. Create a test for it.

Definition at line 299 of file cxImage.cpp.

std::vector< vtkPlanePtr > cx::Image::getAllClipPlanes ( )

virtual

Definition at line 729 of file cxImage.cpp.

vtkImageDataPtr cx::Image::getBaseVtkImageData ( )

virtual

Returns: the vtkimagedata in the data coordinate space

Definition at line 355 of file cxImage.cpp.

bool cx::Image::getCropping ( ) const

virtual

Definition at line 700 of file cxImage.cpp.

DoubleBoundingBox3D cx::Image::getCroppingBox ( ) const

virtual

Definition at line 713 of file cxImage.cpp.

vtkImageDataPtr cx::Image::getGrayScaleVtkImageData ( )

virtual

as getBaseVtkImageData(), but constrained to 1 component if multicolor.

Definition at line 306 of file cxImage.cpp.

vtkImageAccumulatePtr cx::Image::getHistogram ( )

virtual

Returns: The histogram for the image

Definition at line 372 of file cxImage.cpp.

QString cx::Image::getImageType ( ) const

virtual

Reimplemented in cx::UnsignedDerivedImage.

Definition at line 800 of file cxImage.cpp.

double cx::Image::getInitialWindowLevel ( ) const

inline

Definition at line 117 of file cxImage.h.

double cx::Image::getInitialWindowWidth ( ) const

inline

Definition at line 118 of file cxImage.h.

int cx::Image::getInterpolationType ( ) const

Definition at line 856 of file cxImage.cpp.

ImageLUT2DPtr cx::Image::getLookupTable2D ( )

virtual

Definition at line 336 of file cxImage.cpp.

int cx::Image::getMax ( )

virtual

Returns: Return highest used value in the image

Definition at line 414 of file cxImage.cpp.

int cx::Image::getMaxAlphaValue ( )

virtual

Max alpha value (probably 255)

Definition at line 464 of file cxImage.cpp.

int cx::Image::getMin ( )

virtual

Returns: Return lowest used value in the image

Definition at line 450 of file cxImage.cpp.

QString cx::Image::getModality ( ) const

virtual

Reimplemented in cx::UnsignedDerivedImage.

Definition at line 789 of file cxImage.cpp.

int cx::Image::getRange ( )

virtual

For convenience: getMax() - getMin()

Definition at line 459 of file cxImage.cpp.

Image::ShadingStruct cx::Image::getShading ( )

virtual

Definition at line 677 of file cxImage.cpp.

double cx::Image::getShadingAmbient ( )

virtual

Get shading ambient parmeter.

Definition at line 657 of file cxImage.cpp.

double cx::Image::getShadingDiffuse ( )

virtual

Get shading diffuse parmeter.

Definition at line 662 of file cxImage.cpp.

bool cx::Image::getShadingOn ( ) const

virtual

Definition at line 626 of file cxImage.cpp.

double cx::Image::getShadingSpecular ( )

virtual

Get shading specular parmeter.

Definition at line 667 of file cxImage.cpp.

double cx::Image::getShadingSpecularPower ( )

virtual

Get shading specular power parmeter.

Definition at line 672 of file cxImage.cpp.

Eigen::Array3d cx::Image::getSpacing ( ) const

virtual

Definition at line 367 of file cxImage.cpp.

ImageTF3DPtr cx::Image::getTransferFunctions3D ( )

virtual

Definition at line 317 of file cxImage.cpp.

virtual QString cx::Image::getType ( ) const

inlinevirtual

Reimplemented from cx::Data.

Reimplemented in cx::UnsignedDerivedImage.

Definition at line 143 of file cxImage.h.

static QString cx::Image::getTypeName ( )

inlinestatic

Definition at line 147 of file cxImage.h.

ImagePtr cx::Image::getUnsigned ( ImagePtr self )

virtual

Return a version of this, containing image data and transfer functions converted to unsigned. This is used for the 3D texture slicer that doesnt handle signed data.

Definition at line 192 of file cxImage.cpp.

void cx::Image::intitializeFromParentImage ( ImagePtr parentImage )

virtual

Initialize image with properties from parent image, but with separate vtkImageData and name.

Definition at line 172 of file cxImage.cpp.

bool cx::Image::load ( QString path )

virtual

Implements cx::Data.

Definition at line 535 of file cxImage.cpp.

void cx::Image::mergevtkSettingsIntosscTransform ( )

Do the following operations on mBaseVtkImageData:

Reset the origin to zero.
Reset the extent to have its lower-left corner in zero. The shift introduced by these two operations are inserted as a translation into the matrix rMd.

This operation is needed because Image dont support vtkImageData with a nonzero origin or nonzero extent. These must be removed during creation.

Use this method only when you, by using some vtk algorithm, have created a vtkImageData that in nonconform with the Image spec.

Definition at line 761 of file cxImage.cpp.

void cx::Image::moveThisAndChildrenToThread ( QThread * thread )

Move this and all children to thread. Use the thread is generated in a worker thread and the result is to be used in the main thread.

Definition at line 280 of file cxImage.cpp.

void cx::Image::parseXml ( QDomNode & dataNode )

virtual

Use a XML node to load data.

Parameters

dataNode A XML data representation of this object.

Reimplemented from cx::Data.

Definition at line 542 of file cxImage.cpp.

vtkImageDataPtr cx::Image::resample ( long maxVoxels )

Definition at line 863 of file cxImage.cpp.

void cx::Image::resetTransferFunctions	(	bool	_2D = `true`,
		bool	_3D = `true`
	)

Resets the transfer functions and creates new defaut values.

Definition at line 210 of file cxImage.cpp.

void cx::Image::save ( const QString & basePath )

virtual

Implements cx::Data.

Definition at line 911 of file cxImage.cpp.

void cx::Image::setCropping ( bool on )

virtual

Definition at line 689 of file cxImage.cpp.

void cx::Image::setCroppingBox ( const DoubleBoundingBox3D & bb_d )

virtual

Definition at line 705 of file cxImage.cpp.

void cx::Image::setImageType ( const QString & val )

virtual

Definition at line 805 of file cxImage.cpp.

void cx::Image::setInitialWindowLevel	(	double	width,
		double	level
	)

virtual

Definition at line 614 of file cxImage.cpp.

void cx::Image::setInteractiveClipPlane ( vtkPlanePtr plane )

virtual

set a plane that is not saved

Definition at line 743 of file cxImage.cpp.

void cx::Image::setInterpolationType ( int val )

Definition at line 849 of file cxImage.cpp.

void cx::Image::setInterpolationTypeToLinear ( )

Definition at line 845 of file cxImage.cpp.

void cx::Image::setInterpolationTypeToNearest ( )

Definition at line 841 of file cxImage.cpp.

void cx::Image::setLookupTable2D ( ImageLUT2DPtr imageLookupTable2D )

virtual

Definition at line 350 of file cxImage.cpp.

void cx::Image::setModality ( const QString & val )

virtual

Definition at line 794 of file cxImage.cpp.

void cx::Image::setShading ( Image::ShadingStruct shading )

virtual

Definition at line 682 of file cxImage.cpp.

void cx::Image::setShadingAmbient ( double ambient )

virtual

Set shading ambient parmeter.

Definition at line 633 of file cxImage.cpp.

void cx::Image::setShadingDiffuse ( double diffuse )

virtual

Set shading diffuse parmeter.

Definition at line 639 of file cxImage.cpp.

void cx::Image::setShadingOn ( bool on )

virtual

Definition at line 620 of file cxImage.cpp.

void cx::Image::setShadingSpecular ( double specular )

virtual

Set shading specular parmeter.

Definition at line 645 of file cxImage.cpp.

void cx::Image::setShadingSpecularPower ( double specularPower )

virtual

Set shading specular power parmeter.

Definition at line 651 of file cxImage.cpp.

void cx::Image::setTransferFunctions3D ( ImageTF3DPtr transferFuntion )

virtual

Definition at line 331 of file cxImage.cpp.

void cx::Image::setVtkImageData	(	const vtkImageDataPtr &	data,
		bool	resetTransferFunctions = `true`
	)

virtual

Definition at line 289 of file cxImage.cpp.

void cx::Image::startThresholdPreview ( const Eigen::Vector2d & threshold )

Definition at line 920 of file cxImage.cpp.

void cx::Image::stopThresholdPreview ( )

Definition at line 974 of file cxImage.cpp.

void cx::Image::transferFunctionsChanged ( )

signal

emitted when image transfer functions in 2D or 3D are changed.

void cx::Image::transformChangedSlot ( )

protectedvirtualslot

Definition at line 276 of file cxImage.cpp.

void cx::Image::vtkImageDataChanged ( )

signal

emitted when the vktimagedata are invalidated and must be retrieved anew.

Member Data Documentation

vtkImageDataPtr cx::Image::mBaseGrayScaleImageData

protected

image data in data space

Definition at line 194 of file cxImage.h.

vtkImageDataPtr cx::Image::mBaseImageData

protected

image data in data space

Definition at line 193 of file cxImage.h.

DoubleBoundingBox3D cx::Image::mCroppingBox_d

protected

box defining the cropping size.

Definition at line 206 of file cxImage.h.

vtkImageAccumulatePtr cx::Image::mHistogramPtr

protected

Histogram.

Definition at line 198 of file cxImage.h.

QString cx::Image::mImageType

protected

type of the image, defined as DICOM tag (0008,0008) (mainly value 3, but might be a merge of value 4), Section 3, C.7.6.1.1.2

Definition at line 210 of file cxImage.h.

vtkPlanePtr cx::Image::mInteractiveClipPlane

protected

Definition at line 208 of file cxImage.h.

int cx::Image::mInterpolationType

protected

mirror the interpolationType in vtkVolumeProperty

Definition at line 212 of file cxImage.h.

double cx::Image::mMaxRGBIntensity

protected

Definition at line 211 of file cxImage.h.

QString cx::Image::mModality

protected

modality of the image, defined as DICOM tag (0008,0060), Section 3, C.7.3.1.1.1

Definition at line 209 of file cxImage.h.

std::vector<vtkPlanePtr> cx::Image::mPersistentClipPlanes

protected

Definition at line 207 of file cxImage.h.

ShadingStruct cx::Image::mShading

protected

Definition at line 203 of file cxImage.h.

ImagePtr cx::Image::mUnsigned

protected

version of this containing unsigned data.

Definition at line 199 of file cxImage.h.

bool cx::Image::mUseCropping

protected

image should be cropped using mCroppingBox

Definition at line 205 of file cxImage.h.

The documentation for this class was generated from the following files:

/media/jenkins/slave_fs/ws/osr/TGT/ubuntu.12.04.x64/CX/CX/source/resource/core/Data/cxImage.h
/media/jenkins/slave_fs/ws/osr/TGT/ubuntu.12.04.x64/CX/CX/source/resource/core/Data/cxImage.cpp

Classes

Signals

Public Member Functions

Static Public Member Functions

Protected Slots

Protected Attributes

Detailed Description

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation